Find hotels near Shelter Island, San Diego from $89

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Compare 6,697 hotels close to Shelter Island with room rates, reviews, and availability. Most hotels are fully refundable.

Front of property
Pendry San Diego
5.0 star property
9.4 out of 10, Exceptional, (1003)
"Full service hotel, and fantastic location. Accommodating staff, great timing options right in the hotel, as well as ample dining in the gaslamp district."
The price is $285
$371 total
includes taxes & fees
Jun 6 - Jun 7
Pendry San Diego
Exterior
Springhill Suites San Diego Downtown/Bayfront
3.5 star property
9.2 out of 10, Wonderful, (1000)
"Clean, beautiful property right in the waterfront and close to many San Diego attractions. Parking is expensive in this area but reasonable and easy at this hotel. Centrally located with easy access either walkable or train ride to the marina, little Italy, and gas lamp district. Breakfast was good quality with lots of options. The front desk staff were very nice, and were able to accommodate a late check out which was nice for our overnight stay. "
The price is $219
$247 total
includes taxes & fees
May 27 - May 28
Springhill Suites San Diego Downtown/Bayfront
Exterior
Omni San Diego Hotel
4.0 star property
9.0 out of 10, Wonderful, (1903)
"Everything about our trip was great. Start off with the young woman that helped us at the Front Desk check in to the valet that recommended a few places to go eat. On all a great stay the rooms were nice and newly renovated."
The price is $215
$276 total
includes taxes & fees
May 27 - May 28
Omni San Diego Hotel
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Meeting facility
Hotel Republic San Diego, Autograph Collection
4.0 star property
9.0 out of 10, Wonderful, (1314)
"was a nice Stayed quiet and clean "
The price is $170
$217 total
includes taxes & fees
May 27 - May 28
Hotel Republic San Diego, Autograph Collection
Outdoor pool, pool umbrellas, sun loungers
Lamplighter Inn & Suites at SDSU
2.5 star property
9.0 out of 10, Wonderful, (1009)
"This place never disappoints. Service is great and it’s clean and affordable. "
The price is $149
$164 total
includes taxes & fees
May 19 - May 20
Lamplighter Inn & Suites at SDSU
Premium bedding, in-room safe, desk, blackout drapes
Marriott Marquis San Diego Marina
4.0 star property
8.8 out of 10, Excellent, (1827)
"just great!"
The price is $229
$293 total
includes taxes & fees
May 26 - May 27
Marriott Marquis San Diego Marina
2 outdoor pools, sun loungers
Best Western Plus Island Palms Hotel & Marina
3.0 star property
8.8 out of 10, Excellent, (1583)
"Check in lady was spectacular and deserves a raise "
The price is $166
$187 total
includes taxes & fees
May 19 - May 20
Best Western Plus Island Palms Hotel & Marina
Rooftop terrace
Palihotel San Diego
4.0 star property
8.8 out of 10, Excellent, (508)
"A unique experience in a 1912 hotel. Original elevators and room decor. Quaint and unusual. In the middle of the Gaslamp district in downtown San Diego. Very convenient to everything."
The price is $110
$152 total
includes taxes & fees
May 22 - May 23
Palihotel San Diego
Lobby
Gaslamp Plaza Suites
3.5 star property
8.8 out of 10, Excellent, (1006)
"The checkin was smooth and the staff is very helpful. Room looks good. "
The price is $109
$120 total
includes taxes & fees
May 22 - May 23
Gaslamp Plaza Suites
Balcony view
La Jolla Shores Hotel
3.0 star property
8.8 out of 10, Excellent, (1264)
"I am a regular at the Shores. I always stay there because it is right on the beach and well managed. The front desk staff and bellmen are so polite and helpful. The Bar is iconic with its big windows and great service! "
The price is $379
$463 total
includes taxes & fees
Jun 18 - Jun 19
La Jolla Shores Hotel
Aerial view
The Dana on Mission Bay
3.5 star property
8.6 out of 10, Excellent, (2442)
"It was nice to stay at the Dana where I can always know what I’m getting. A friendly check in process , easy parking and clean room. I visit often because my son and several of my girlfriends live in SD. Using the hotel.com app I was able to use my points and received a fantastic rate even on Mother’s Day weekend."
The price is $179
$202 total
includes taxes & fees
May 19 - May 20
The Dana on Mission Bay
Exterior
Loews Coronado Bay Resort
4.0 star property
8.6 out of 10, Excellent, (1055)
"This hotel is amazing!!! Don’t stay anywhere else. Phenomenal staff. So clean. Great amenities. Loved it!"
The price is $219
$289 total
includes taxes & fees
May 27 - May 28
Loews Coronado Bay Resort
2 bars/lounges
San Diego Marriott Gaslamp Quarter
4.0 star property
8.6 out of 10, Excellent, (1053)
"The location, very friendly staff "
The price is $169
$191 total
includes taxes & fees
May 23 - May 24
San Diego Marriott Gaslamp Quarter
Exterior
Embassy Suites by Hilton San Diego Bay Downtown
4.0 star property
8.6 out of 10, Excellent, (1095)
"Our premium room was well maintained, clean, has the bay view. A little hard to turn on the water in the shower without getting splashed by cold water(sliding glass door). Valet parking fee was outrageous, almost 1/3 of your room cost. The timeshare people, yeah pretty aggressive in selling their products, i find it bugging. Upon check-in we weren’t offered the reusable water bottles by the front desk. Enjoyed the indoor pool. No hot tub, but i guess it’s okay. The complimentary drinks were...
The price is $195
$248 total
includes taxes & fees
May 27 - May 28
Embassy Suites by Hilton San Diego Bay Downtown
Aerial view
Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very Good, (1819)
"Great property "
The price is $209
$281 total
includes taxes & fees
May 27 - May 28
Paradise Point Resort & Spa
Outdoor pool, sun loungers
Hilton San Diego Bayfront
4.0 star property
8.4 out of 10, Very Good, (1488)
"Loved how close to downtown, staff was very helpful with any questions asked. Would definitely recommend coming to this hotel to family and friends. Only downfall was that the pool/hottub closed at 8 pm. Seems a bit early. Also not able to use the outdoor heaters due to a private event, would’ve liked to be able to use as well.😊"
The price is $158
$226 total
includes taxes & fees
May 27 - May 28
Hilton San Diego Bayfront
Water view
Kona Kai San Diego
4.0 star property
8.4 out of 10, Very Good, (947)
"location was wonderful - if you like to be surrounded by water and in a quiet area this is perfect. would have liked a few more options for food that was low fat and healthy and a little less costly, but that may be the norm these days in CA. overall - would return, room is comfortable and access to view and water is wonderful!"
The price is $229
$309 total
includes taxes & fees
May 28 - May 29
Kona Kai San Diego
Bar (on property)
Sheraton Mission Valley San Diego Hotel
4.0 star property
8.4 out of 10, Very Good, (1104)
"Riki was incredible checking us in and providing exemplary customer service. Beautiful property and room. Thank you Riki for all of your help making our stay incredible. A beautiful choice for a weekend in San Diego "
The price is $134
$151 total
includes taxes & fees
May 27 - May 28
Sheraton Mission Valley San Diego Hotel
Exterior
Wyndham San Diego Bayside
4.0 star property
8.2 out of 10, Very Good, (5902)
"I like the fact that the hotel is close to harbor and so many activities!"
The price is $152
$171 total
includes taxes & fees
May 27 - May 28
Wyndham San Diego Bayside
Outdoor pool, open 9:00 AM to 9:00 PM, cabanas (surcharge)
San Diego Mission Bay Resort
4.0 star property
8.2 out of 10, Very Good, (1016)
"Very good"
The price is $220
$292 total
includes taxes & fees
May 27 - May 28
San Diego Mission Bay Resort
Don't see what you're looking for?
See all available properties in Shelter Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Shelter Island Travel Info

Number of reviews
33,063
Closest neighborhoods
Mission Valley West, Midway District and Downtown San Diego
4-star hotels
Tower23 Hotel, Paradise Point Resort & Spa and Kona Kai Resort & Spa, A Noble House Resort
3-star hotels
Courtyard by Marriott San Diego Airport/Liberty Station, Homewood Suites by Hilton San Diego Airport/Liberty Station and Rockaway Cottage
Location
San Diego, United States of America
Lowest price
$89
Highest price
$379

Hotels near Other San Diego Attractions

Image for San Diego Yacht Club

San Diego Yacht Club

4/5(15 reviews)

Explore the waterfront in San Diego with a trip to San Diego Yacht Club. Discover the beautiful sunsets and top-notch restaurants in this walkable area.

See properties
San Diego Yacht Club

Frequently asked questions

What's the area like around Shelter Island?

Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, check out the 62 hotels and other accommodations you'll find within a mile.

Where is the best place to stay near Shelter Island?

Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Kona Kai San Diego.

How many hotels will I be able to find near Shelter Island?

Expedia has 62 hotels and other accommodations within a mile from Shelter Island.

If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable provided that you cancel before the accommodation's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and be given a refund within 24 hours of your booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to view the top deals on offer near Shelter Island.

Where can I learn more about changing or cancelling my trip in the area near Shelter Island?

For more details about rescheduling or cancelling your stay near Shelter Island, click here.

What can I see and do near Shelter Island?

You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego, or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse, and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park, and San Diego Civic Theatre.

Recent reviews of Shelter Island hotels
Expedia verified reviews

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor

5/5 Excellent
"The parking isnt really big on one side"
A verified traveler stayed at Comfort Inn San Diego Airport At The Harbor
Posted 23 hours ago
Comfort Inn San Diego Airport At The Harbor