Photo by Shawn Blance

Find hotels in Clayton, NY from $55

    Plan, book, stay with confidence
    bex rewards loyalty icon
    Be picky
    Search almost a million properties worldwide
    one key icon
    Treat yourself
    Save instantly and earn perks with One Key
    today icon
    Change your mind
    Book hotels with free cancellation

Check Clayton hotel prices

Tomorrow night
Next weekend

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveler experience
Traveler experience

Compare 440 hotels, room rates, hotel reviews and availability. Most hotels are fully refundable.

Ramada by Wyndham Gananoque Provincial Inn
2.5 star property
8.2 out of 10, Very Good, (1007)
"The stay was super good, clean washroom, clean house and comfortable bed. "
The price is $55
$65 total
includes taxes & fees
Jun 16 - Jun 17
Ramada by Wyndham Gananoque Provincial Inn
Super 8 by Wyndham Gananoque/Country Squire Resort
2.5 star property
7.4 out of 10, Good, (1001)
"I booked a room with a jacuzzi and it was very relaxing and what was unique was the room had patio doors open to a sitting area out back which was nice to sit and enjoy reading a book etc. Staff are lovely and friendly people."
The price is $67
$78 total
includes taxes & fees
Jun 2 - Jun 3
Super 8 by Wyndham Gananoque/Country Squire Resort
Howard Johnson by Wyndham Gananoque
2.5 star property
8.0 out of 10, Very Good, (1009)
"Great price, good location and exceptional customer service. "
The price is $65
$77 total
includes taxes & fees
Jun 2 - Jun 3
Howard Johnson by Wyndham Gananoque
Save an average of 15% on thousands of hotels when you're signed in
Colonial Resort-1000 Islands
3.0 star property
7.0 out of 10, Good, (931)
"Little run down . Need some updates however was quite and relaxing for a night stay"
The price is $58
$69 total
includes taxes & fees
Jun 5 - Jun 6
Colonial Resort-1000 Islands
Gananoque Inn & Spa
3.0 star property
8.0 out of 10, Very Good, (905)
"It’s fine. There is no elevator in the building, the rooms are dated and a bit run down (it’s a very old building). The staff was very helpful and friendly. Nothing specific to complain about, but nothing special either."
The price is $124
$146 total
includes taxes & fees
Jun 2 - Jun 3
Gananoque Inn & Spa
Riveredge Resort
3.5 star property
8.4 out of 10, Very Good, (1005)
"The bathroom ceiling was peeling. The bathroom tub and sink were stained , after one night house keeping came in and cleaned. The room looked cleaner then when we arrived. And they put more tea bags and cups but not coffee I had to go ask for coffee. Towels are dingy. Pool looked like it needed cleaned. Hot tub closed. And when the tiki bar is opened good luck with parking. Restaurant on site are very pricy. Staff was very nice. And they don’t clean the balconies so you can’t sit out there...
The price is $145
$161 total
includes taxes & fees
Jun 2 - Jun 3
Riveredge Resort
Holiday Inn Express Hotel & Suites Gananoque, an IHG Hotel
2.5 star property
9.0 out of 10, Wonderful, (1002)
"This has been a great property to stay at. Staff and location have been wonderful. Thank you"
The price is $112
$131 total
includes taxes & fees
Jun 6 - Jun 7
Holiday Inn Express Hotel & Suites Gananoque, an IHG Hotel
Comfort Inn & Suites Thousand Islands Harbour District
2.5 star property
8.6 out of 10, Excellent, (1001)
"Enjoyed our stay"
The price is $79
$92 total
includes taxes & fees
Jun 4 - Jun 5
Comfort Inn & Suites Thousand Islands Harbour District
Days Inn by Wyndham Evans Mills/Fort Drum
2.0 star property
8.6 out of 10, Excellent, (1005)
"The only complaint was not about Days Inn, but when we punched in Days Inn it kept taking us the Royal Motel "
The price is $72
$80 total
includes taxes & fees
Jun 10 - Jun 11
Days Inn by Wyndham Evans Mills/Fort Drum
Travelodge by Wyndham Gananoque
2.0 star property
7.8 out of 10, Good, (799)
"Room was nice and it was clean. Beds were comfortable. Staff were helpful and friendly. Able to sit out front and back. Will go back. "
The price is $67
$78 total
includes taxes & fees
Jun 16 - Jun 17
Travelodge by Wyndham Gananoque
Bonnie Castle Resort & Marina
3.0 star property
7.0 out of 10, Good, (1003)
"Nice view & friendly staffs"
The price is $116
$133 total
includes taxes & fees
Jun 2 - Jun 3
Bonnie Castle Resort & Marina
The Glen House Resort
3.5 star property
8.0 out of 10, Very Good, (151)
"The staff was extremely friendly and responsive. "
The price is $132
$149 total
includes taxes & fees
Jun 4 - Jun 5
The Glen House Resort
IMPERIAL INN 1000 islands
2.0 star property
7.2 out of 10, Good, (560)
"The hotel staff were welcoming, smiling, complimentary, informative, no hesitation to take care of our requests. We even got a "goodbye, have a good trip" when checking out. "
The price is $58
$68 total
includes taxes & fees
Jun 2 - Jun 3
IMPERIAL INN 1000 islands
1000 Islands Harbor Hotel
3.5 star property
9.4 out of 10, Exceptional, (998)
"Liked the indoor pool and hot tub. Bathrobes in rooms, turndown bed service with chocolates. Staff very willing to help with local information on restaurants and attractions. Very accommodating with any of our requests. Upscale property experience!"
The price is $212
$235 total
includes taxes & fees
Jun 16 - Jun 17
1000 Islands Harbor Hotel
Capt. Thomson's Resort
3.0 star property
9.4 out of 10, Exceptional, (1001)
"Courteous staff, clean room and bath. Easy check in and out. Wonderful refrigerator. "
Capt. Thomson's Resort
Capt.'s Inn & Suites
2.0 star property
8.4 out of 10, Very Good, (1006)
"Captains Inn was above and beyond all I could of expected. Rooms were beautiful, clean, Bed was incredible, best sleep I've had in a motel room bed. A very enjoyable experience, I've recommended to friends on Facebook today already as well as the restaurant North Star in front of the inn. Thank you "
The price is $55
$61 total
includes taxes & fees
Jun 2 - Jun 3
Capt.'s Inn & Suites
Capricorn Motel Royale Thousand Islands
2.5 star property
8.2 out of 10, Very Good, (230)
"Here is very convenience to stay, people are friendly, room is clear...."
The price is $80
$90 total
includes taxes & fees
Jun 2 - Jun 3
Capricorn Motel Royale Thousand Islands
Royal Inn Motel
2.0 star property
7.2 out of 10, Good, (325)
"Old, and broken light in the room. But the customer service made up for any short falls. Would definitely book again"
The price is $62
$69 total
includes taxes & fees
Jun 2 - Jun 3
Royal Inn Motel
The Woodview Inn
4.0 star property
9.6 out of 10, Exceptional, (367)
"The historic charm of the inn, complemented by its modern comforts, created an ambiance of complete relaxation for me and my family. The location is ideal for anyone looking to explore the Thousand Islands, with easy access to boat tours and the quaint downtown. Plus, the owners are amazing! We will go back there for sure! "
The price is $168
$198 total
includes taxes & fees
Jun 2 - Jun 3
The Woodview Inn
1000 Islands B&B – The Bulloch House
4.5 star property
9.8 out of 10, Exceptional, (265)
"Michelle and her husband were very gracious and charming hosts. We will definitely return. "
The price is $149
$175 total
includes taxes & fees
Jun 25 - Jun 26
1000 Islands B&B – The Bulloch House
Don't see what you're looking for?
See all available properties in Clayton
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

More cheap stays in Clayton

Stay near popular Clayton attractions

Clayton Travel Info

Number of reviews
6,017
Accommodation
440 hotels
Highest price
$212
Lowest price
$55
Reasons to visit
Thousand Islands Winery, Coyote Moon Vineyards and Cedar Point State Park
Hotels with golf
3
Hotels with nearby historical attractions
4

Frequently asked questions

Where is the best place to stay in Clayton?

1000 Islands Harbor Hotel is a favorite with Expedia customers. This hotel is a short 1-minute walk from Lake Ontario, and it offers a restaurant and an indoor pool. Traveler reviews also recommend West Winds Motel & Cottages and The Clipper Inn as top choices for your stay. See all available top hotels, or vacation rentals in Clayton.

What are some of the best vacation rentals in Clayton?

1000 Islands - Clayton Family Rental: This highly rated vacation home rental in Clayton is located on a river and has a patio, a garden, and a barbecue grill to put you at ease in your new surroundings. It has 4 bedrooms as well as a kitchen with a dishwasher, a fridge, and a stovetop, so you can cook with friends or family. Other favorite homes for rent in Clayton are Waterfront 5 Bedroom Grindstone Island Farmhouse and Comfy Two Bedroom Thousand Islands Getaway. See all vacation rentals in Clayton.

If I need to cancel my hotel reservation in Clayton, will I receive a refund?

Yes! Most hotel bookings are fully refundable provided that you cancel prior to the hotel's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a non-refundable reservation, it might still be possible to cancel it and be given a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Clayton.

Where can I learn more about changing or cancelling my trip to Clayton?

To access more information about picking new dates or cancelling your trip to Clayton, go to https://www.expedia.com/service/.

What's the best place to stay on a budget in Clayton?

Based on reviews, The Clipper Inn is a popular 3-star inn for our travelers looking for an economical choice, and features free WiFi and free parking. View all budget hotels in Clayton.

What's the best place to stay for families in Clayton?

Rustic Getaway Set on French Creek is a lodge with in-room kitchens and a playground, and it's a top choice on Expedia for families. Other choices for your kid-friendly vacation include 1000 Islands Harbor Hotel and West Winds Motel & Cottages. Attractions in the area like Gananoque Boat Line and Alex Bay 500 Go-Karts are also fun for kids of all ages. Find more child-friendly accommodations in Clayton.

What's the best accommodation for a romantic vacation in Clayton?

1000 Islands Harbor Hotel is a favorite 3.5-star hotel for couples, and features 24-hour room service and an indoor pool.

What's the best pet-friendly place to stay in Clayton?

The Clipper Inn is a top dog-friendly inn, and offers a restaurant along with free WiFi for its human guests. Other good options for you and your pet include West Winds Motel & Cottages and Rustic Getaway Set on French Creek. See more pet-friendly hotel accommodations in Clayton.

Where is the best hotel to stay near Coyote Moon Vineyards?

1000 Islands Harbor Hotel is one of the top choices for your stay based on our traveler data, and this 3.5-star hotel offers a restaurant and an indoor pool. It's located 3.1 mi (5 km) from Coyote Moon Vineyards. Another good choice is The Clipper Inn, located 2.6 mi (4.2 km) away.

What about the best place to stay close to Clayton Island Tours?

One of the top choices for your stay is 1000 Islands Harbor Hotel, located next to Clayton Island Tours, and this 3.5-star hotel offers a restaurant and an indoor pool. Wooden Boat Inn and The Clipper Inn are two other good options within 5 miles.

What's the best hotel for a golf vacation in Clayton?

The Clipper Inn is a top inn that has an adjacent golf course and features free WiFi. Another good choice is Wooden Boat Inn if you'd like to be close to a golf course while in town. You can tee off at C-Way Golf Course during your trip. See more golf hotels in Clayton.

What are some accommodations with pools in Clayton?

1000 Islands Harbor Hotel: Hotel, 1-minute walk from Lake Ontario. Features free self parking, an indoor pool, and complimentary wireless internet access. Another option with an onsite pool is West Winds Motel & Cottages. View all hotels with pools in Clayton.

Recent reviews of Clayton hotels
Expedia verified reviews